2020-02-20 18:23:42,819 INFO [main] (IsisFish.java:136) main - Starting Isis-Fish 4.4.2.5 with args : [] 2020-02-20 18:23:42,824 INFO [main] (IsisFish.java:137) main - Date: 20/02/20 18:23 2020-02-20 18:23:42,824 INFO [main] (IsisFish.java:138) main - Java version: 1.8.0_221-b11, Java HotSpot(TM) 64-Bit Server VM 2020-02-20 18:23:42,825 INFO [main] (IsisFish.java:139) main - Plaform/arch: Mac OS X/x86_64 2020-02-20 18:23:42,825 INFO [main] (IsisFish.java:140) main - R_HOME: null 2020-02-20 18:23:42,825 INFO [main] (IsisFish.java:141) main - PATH: /Library/Frameworks/Python.framework/Versions/3.6/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin 2020-02-20 18:23:43,777 WARN [main] (RUtil.java:98) parseRscriptOutput - Can't locate rJava package using Rscript (probably not installed) 2020-02-20 18:23:44,606 INFO [main] (IsisFish.java:354) initVCS - Check state of local repository: /Users/charlotte/isis-fish-4/isis-database 2020-02-20 18:23:44,610 INFO [main] (VCSSVN.java:144) getSVNManager - Try to connect to http://svn.forge.codelutin.com/svn/isis-fish-data 2020-02-20 18:23:46,672 INFO [main] (VCSSVN.java:236) isConnected - Connexion au serveur disponible, passage en mode connecté : http://svn.forge.codelutin.com/svn/isis-fish-data 2020-02-20 18:23:52,361 INFO [main] (VCSSVN.java:144) getSVNManager - Try to connect to http://svn.forge.codelutin.com/svn/isis-fish-community 2020-02-20 18:23:53,416 INFO [main] (VCSSVN.java:236) isConnected - Connexion au serveur disponible, passage en mode connecté : http://svn.forge.codelutin.com/svn/isis-fish-community 2020-02-20 18:23:55,406 INFO [main] (IsisFish.java:166) main - after init done in 12.701. 2020-02-20 18:23:55,412 INFO [Thread-3] (CronService.java:84) run - Starting 1 registered services 2020-02-20 18:23:55,430 INFO [AWT-EventQueue-0] (SimulationExecutor.java:87) - SimulationExecutor started with 4 thread for dans un sous processus 2020-02-20 18:23:55,690 INFO [AWT-EventQueue-0] (SimulationExecutor.java:87) - SimulationExecutor started with 2 thread for sur le serveur Datarmor 2020-02-20 18:23:55,698 INFO [AWT-EventQueue-0] (SimulationExecutor.java:87) - SimulationExecutor started with 2 thread for dans le même processus 2020-02-20 18:23:55,829 INFO [AWT-EventQueue-0] (IsisTray.java:117) getInstance - Use system tray: fr.ifremer.isisfish.IsisTray$AWTSystemTray 2020-02-20 18:24:18,310 INFO [AWT-EventQueue-0] (RegionStorage.java:233) getRegion - Try to open region sar_gdl_v2_v4.4.2.5(/Users/charlotte/isis-fish-4/isis-database/regions/sar_gdl_v2_v4.4.2.5) 2020-02-20 18:24:18,311 INFO [AWT-EventQueue-0] (DataStorage.java:205) getStorage - Create new storage for sar_gdl_v2_v4.4.2.5 2020-02-20 18:24:34,991 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:34,993 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:34,995 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:34,996 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:34,996 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:34,998 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:34,999 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,000 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,001 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,002 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,003 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,005 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,006 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,006 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,007 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,010 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,011 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,012 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,013 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,014 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,015 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,016 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,017 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,018 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,019 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,020 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,021 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,021 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,022 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:24:35,023 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,989 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,992 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,993 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,993 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,994 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,995 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,996 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,996 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,997 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,997 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,998 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,998 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,999 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:03,999 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:25:04,000 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:26:34,381 INFO [AWT-EventQueue-0] (SimulationStorage.java:571) getSimulation - Try to open simulation sim_sar-pop_only-test-1an-10000ind_2020-02-20-14-10(/Users/charlotte/isis-fish-4/isis-database/simulations/sim_sar-pop_only-test-1an-10000ind_2020-02-20-14-10) 2020-02-20 18:26:34,390 INFO [AWT-EventQueue-0] (ParamsHandler.java:233) loadOldSimulation - No xml design plan file found 2020-02-20 18:26:46,760 ERROR [AWT-EventQueue-0] (ParamsHandler.java:401) launchSimulationWithSensibility - Can't start simulation fr.ifremer.isisfish.IsisFishRuntimeException: Can't get scenarios from calculator at fr.ifremer.isisfish.simulator.launcher.SimulationService.submit(SimulationService.java:527) ~[isis-fish-4.4.2.5.jar:4.4.2.5] at fr.ifremer.isisfish.ui.simulator.ParamsHandler.launchSimulationWithSensibility(ParamsHandler.java:396) [isis-fish-4.4.2.5.jar:4.4.2.5] at fr.ifremer.isisfish.ui.simulator.ParamsHandler.launchSimulation(ParamsHandler.java:356) [isis-fish-4.4.2.5.jar:4.4.2.5] at fr.ifremer.isisfish.ui.simulator.ParamsUI.doActionPerformed__on__buttonSimulParamsSimulate(ParamsUI.java:363) [isis-fish-4.4.2.5.jar:4.4.2.5] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[?:1.8.0_221] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[?:1.8.0_221] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[?:1.8.0_221] at java.lang.reflect.Method.invoke(Method.java:498) ~[?:1.8.0_221] at jaxx.runtime.JAXXUtil$1.invoke(JAXXUtil.java:253) [jaxx-runtime-2.43.jar:2.43] at com.sun.proxy.$Proxy19.actionPerformed(Unknown Source) [?:?] at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2022) [?:1.8.0_221] at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2348) [?:1.8.0_221] at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402) [?:1.8.0_221] at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259) [?:1.8.0_221] at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:252) [?:1.8.0_221] at java.awt.Component.processMouseEvent(Component.java:6539) [?:1.8.0_221] at javax.swing.JComponent.processMouseEvent(JComponent.java:3324) [?:1.8.0_221] at java.awt.Component.processEvent(Component.java:6304) [?:1.8.0_221] at java.awt.Container.processEvent(Container.java:2239) [?:1.8.0_221] at java.awt.Component.dispatchEventImpl(Component.java:4889) [?:1.8.0_221] at java.awt.Container.dispatchEventImpl(Container.java:2297) [?:1.8.0_221] at java.awt.Component.dispatchEvent(Component.java:4711) [?:1.8.0_221] at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4904) [?:1.8.0_221] at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4535) [?:1.8.0_221] at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4476) [?:1.8.0_221] at java.awt.Container.dispatchEventImpl(Container.java:2283) [?:1.8.0_221] at java.awt.Window.dispatchEventImpl(Window.java:2746) [?:1.8.0_221] at java.awt.Component.dispatchEvent(Component.java:4711) [?:1.8.0_221] at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760) [?:1.8.0_221] at java.awt.EventQueue.access$500(EventQueue.java:97) [?:1.8.0_221] at java.awt.EventQueue$3.run(EventQueue.java:709) [?:1.8.0_221] at java.awt.EventQueue$3.run(EventQueue.java:703) [?:1.8.0_221] at java.security.AccessController.doPrivileged(Native Method) [?:1.8.0_221] at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74) [?:1.8.0_221] at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84) [?:1.8.0_221] at java.awt.EventQueue$4.run(EventQueue.java:733) [?:1.8.0_221] at java.awt.EventQueue$4.run(EventQueue.java:731) [?:1.8.0_221] at java.security.AccessController.doPrivileged(Native Method) [?:1.8.0_221] at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74) [?:1.8.0_221] at java.awt.EventQueue.dispatchEvent(EventQueue.java:730) [?:1.8.0_221] at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205) [?:1.8.0_221] at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116) [?:1.8.0_221] at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105) [?:1.8.0_221] at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101) [?:1.8.0_221] at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93) [?:1.8.0_221] at java.awt.EventDispatchThread.run(EventDispatchThread.java:82) [?:1.8.0_221] Caused by: java.lang.NullPointerException at fr.ifremer.isisfish.simulator.launcher.SimulationService.submit(SimulationService.java:466) ~[isis-fish-4.4.2.5.jar:4.4.2.5] ... 45 more 2020-02-20 18:26:56,143 INFO [AWT-EventQueue-0] (ParamsHandler.java:233) loadOldSimulation - No xml design plan file found 2020-02-20 18:27:11,249 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - backup database en cours 2020-02-20 18:27:11,338 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - backup database terminé 2020-02-20 18:27:11,351 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - Compilation des scripts 2020-02-20 18:27:12,246 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - Temps de compilation 0.893s 2020-02-20 18:27:12,358 INFO [pool-3-thread-1] (SimulationJob.java:210) run - Start simulation: sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 2020-02-20 18:27:12,363 INFO [pool-3-thread-1] (SimulationMonitor.java:347) simulationStart - Saving simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 as started 2020-02-20 18:27:12,364 INFO [pool-3-thread-1] (SubProcessSimulationLauncher.java:142) message - Préparation de la simulation 2020-02-20 18:27:12,365 INFO [pool-3-thread-1] (SimulationControl.java:206) setText - Préparation de la simulation 2020-02-20 18:27:12,370 INFO [AWT-EventQueue-0] (SimulationStorage.java:571) getSimulation - Try to open simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27(/Users/charlotte/isis-fish-4/isis-database/simulations/sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27) 2020-02-20 18:27:12,396 INFO [pool-3-thread-1] (SubProcessSimulationLauncher.java:239) subProcessSimulate - SubProcess start: java.lang.UNIXProcess@72f88294 [/Library/Java/JavaVirtualMachines/jdk1.8.0_221.jdk/Contents/Home/jre/bin/java, -Xmx1024M, -Djava.library.path=/Users/charlotte/isis-fish-4.4.2.5//Users/charlotte/Library/Java/Extensions:/Library/Java/Extensions:/Network/Library/Java/Extensions:/System/Library/Java/Extensions:/usr/lib/java:., -DR.type=jni, -classpath, :/System/Library/Java/Extensions/MRJToolkit.jar:/Users/charlotte/isis-fish-4.4.2.5/isis-fish-4.4.2.5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-utils-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-primitives-1.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-converter-1.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-config-3.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-version-1.0-rc-2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-validator-3.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/struts2-core-2.5.13.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ognl-3.1.15.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-fileupload-1.3.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-i18n-3.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/topia-persistence-2.13.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-csv-3.0-rc-6.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/javacsv-2.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-decorator-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-jxpath-1.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-jpa-2.1-api-1.0.0.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jta-1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/topia-service-migration-2.13.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-core-5.2.18.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jboss-logging-3.3.1.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/antlr-2.7.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jboss-transaction-api_1.2_spec-1.0.1.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jandex-2.0.3.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/classmate-1.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-commons-annotations-5.0.1.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-jcache-5.2.18.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/cache-api-1.0.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ehcache-3.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-hikaricp-5.2.18.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/HikariCP-2.5.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/asm-6.2.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-profiling-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-matrix-2.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-matrix-gui-2.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jfreechart-1.0.19.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jcommon-1.0.23.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-widgets-1.1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-lang-2.5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-collections-3.2.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/rsyntaxtextarea-2.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/rstaui-2.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/autocomplete-2.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-runtime-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/javahelp-2.0.05.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-config-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-common-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-validator-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-widgets-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-autocomplete-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jxlayer-3.0.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-j2r-1.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/JRI-0.9-9.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/REngine-1.8-5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/Rserve-1.8-5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-lang3-3.8.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-text-1.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-collections4-4.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-beanutils-1.9.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-io-2.6.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-math3-3.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/slf4j-api-1.7.25.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-logging-1.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-core-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-api-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-jcl-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-slf4j-impl-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/dom4j-2.1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxen-1.1.6.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/openmap-5.1.15.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsch-0.1.54.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-core-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-action-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-plaf-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-graphics-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-painters-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/h2-1.4.197.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/aspectjweaver-1.9.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jdistlib-0.4.5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/JTransforms-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/JLargeArrays-1.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ssj-3.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/colt-1.2.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/optimization-1.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/concurrent-1.3.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsr331-api-2.7.0-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/svnkit-1.9.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/sequence-library-1.0.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/sqljet-1.1.11.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/antlr-runtime-3.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/trilead-ssh2-1.0.0-build221.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsch.agentproxy.svnkit-trilead-ssh2-0.0.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsch.agentproxy.core-0.0.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/freemarker-2.3.28.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ecj-4.12.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/guava-26.0-jre.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsr305-3.0.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/checker-qual-2.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/error_prone_annotations-2.1.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/j2objc-annotations-1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/animal-sniffer-annotations-1.14.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/opencsv-4.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jackson-core-2.9.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jackson-databind-2.9.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jackson-annotations-2.9.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxb-api-2.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxb-core-2.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxb-impl-2.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/activation-1.1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/javassist-3.25.0-GA.jar, fr.ifremer.isisfish.IsisFish, --option, launch.ui, false, --simulateWithSimulation, sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27, /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219631242-preparation.zip] 2020-02-20 18:27:12,398 INFO [pool-3-thread-1] (SubProcessSimulationLauncher.java:279) - Lancement du thread de surveillance des simulations externes 2020-02-20 18:27:14,247 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:14,243 INFO [main] (IsisFish.java:136) main - Starting Isis-Fish 4.4.2.5 with args : [--option, launch.ui, false, --simulateWithSimulation, sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27, /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219631242-preparation.zip] 2020-02-20 18:27:14,251 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:14,251 INFO [main] (IsisFish.java:137) main - Date: 20/02/20 18:27 2020-02-20 18:27:14,252 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:14,251 INFO [main] (IsisFish.java:138) main - Java version: 1.8.0_221-b11, Java HotSpot(TM) 64-Bit Server VM 2020-02-20 18:27:14,252 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:14,252 INFO [main] (IsisFish.java:139) main - Plaform/arch: Mac OS X/x86_64 2020-02-20 18:27:14,252 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:14,252 INFO [main] (IsisFish.java:140) main - R_HOME: null 2020-02-20 18:27:14,253 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:14,252 INFO [main] (IsisFish.java:141) main - PATH: /Library/Frameworks/Python.framework/Versions/3.6/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin 2020-02-20 18:27:15,220 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,219 WARN [main] (RUtil.java:98) parseRscriptOutput - Can't locate rJava package using Rscript (probably not installed) 2020-02-20 18:27:15,298 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,298 INFO [main] (IsisFish.java:166) main - after init done in 1.281. 2020-02-20 18:27:15,299 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,299 INFO [main] (SimulationAction.java:173) simulateWithSimulationAndScript - Command line action : simulateWithSimulationAndScript (sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27, /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219631242-preparation.zip, null) 2020-02-20 18:27:15,314 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,314 INFO [main] (SimulationExecutor.java:87) - SimulationExecutor started with 4 thread for dans un sous processus 2020-02-20 18:27:15,421 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,421 INFO [main] (SimulationExecutor.java:87) - SimulationExecutor started with 2 thread for sur le serveur Datarmor 2020-02-20 18:27:15,422 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,422 INFO [main] (SimulationExecutor.java:87) - SimulationExecutor started with 2 thread for dans le même processus 2020-02-20 18:27:15,423 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,423 INFO [main] (InProcessSimulatorLauncher.java:106) simulate - simulate sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 with file /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219631242-preparation.zip 2020-02-20 18:27:15,434 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,434 WARN [main] (InProcessSimulatorLauncher.java:114) simulate - Warning , simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 aleady exists 2020-02-20 18:27:15,435 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,434 WARN [main] (InProcessSimulatorLauncher.java:115) simulate - Deleting it before doing simulation 2020-02-20 18:27:15,435 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,435 INFO [main] (SimulationStorage.java:571) getSimulation - Try to open simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27(/Users/charlotte/isis-fish-4/isis-database/simulations/sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27) 2020-02-20 18:27:15,438 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,437 INFO [main] (SimulationStorage.java:773) importAndRenameZip - Import simulation file /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219631242-preparation.zip in directory /Users/charlotte/isis-fish-4/isis-database/simulations and rename from ^.*?/(.*)$ to sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27/$1 2020-02-20 18:27:15,495 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,495 INFO [main] (SimulationStorage.java:780) importAndRenameZip - Last entry was sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27/scripts/MinimisationUtil.java extract name sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 2020-02-20 18:27:15,496 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:15,496 INFO [main] (DataStorage.java:205) getStorage - Create new storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 2020-02-20 18:27:25,674 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:25,674 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (InProcessSimulatorLauncher.java:338) localSimulateSameThread - 20/02/20 18:27 Java version: 1.8.0_221-b11 Isis-fish version: 4.4.2.5 2020-02-20 18:27:26,230 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:26,230 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (InProcessSimulatorLauncher.java:199) message - Mise en place des aspects Cache 2020-02-20 18:27:26,231 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:26,231 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (SimulationControl.java:206) setText - Mise en place des aspects Cache 2020-02-20 18:27:27,373 INFO [monitor-thread] (SimulationControl.java:206) setText - Mise en place des aspects Cache 2020-02-20 18:27:28,175 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:28,175 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (DataStorage.java:162) getMemStorage - Create new memory storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 2020-02-20 18:27:28,747 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:28,747 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (DataStorage.java:205) getStorage - Create new storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 2020-02-20 18:27:28,752 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:28,751 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (TopiaContextImpl.java:247) loadServices - Service 'topia.service.migration' chargé par 'org.nuiton.topia.migration.TopiaMigrationEngine' 2020-02-20 18:27:30,681 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:30,681 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (TopiaMigrationEngine.java:547) detectDbVersion - Version de base détectée : 4.4 2020-02-20 18:27:30,682 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:30,682 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (TopiaMigrationEngine.java:313) migrateSchema - Démarrage du service de mise à jour - version de l'application : 4.4, version de la base : 4.4 2020-02-20 18:27:30,707 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:30,707 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (TopiaMigrationEngine.java:338) migrateSchema - La base est à jour, aucune migration nécessaire. 2020-02-20 18:27:31,298 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:31,297 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (InProcessSimulatorLauncher.java:199) message - Simulation execution 2020-02-20 18:27:31,298 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:31,298 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (SimulationControl.java:206) setText - Simulation execution 2020-02-20 18:27:31,303 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:31,303 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (SimulationContext.java:486) message - Exécution des scripts de Presimulation 2020-02-20 18:27:31,304 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:31,303 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (SimulationControl.java:206) setText - Exécution des scripts de Presimulation 2020-02-20 18:27:31,322 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:31,322 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (InProcessSimulatorLauncher.java:428) localSimulateSameThread - Matrix backend: org.nuiton.math.matrix.DoubleBigVector and org.nuiton.math.matrix.DoubleSparseHashVector threshold: 1000 2020-02-20 18:27:31,810 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:31,810 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (IsisCacheBackendOnGuava.java:238) adjustedCache - Cache size ajusted to 410,5Mo (equivalent to 0 step need) 2020-02-20 18:27:32,368 INFO [monitor-thread] (SimulationControl.java:206) setText - Exécution des scripts de Presimulation 2020-02-20 18:27:32,809 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:32,808 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (SimulationControl.java:206) setText - Rules initialisation:[] 2020-02-20 18:27:32,835 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:32,835 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (SimulationControl.java:206) setText - begin step janvier 0 2020-02-20 18:27:32,836 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:32,836 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (SimulationControl.java:206) setText - Reloading parameters 2020-02-20 18:27:32,840 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:32,839 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (SimulationControl.java:206) setText - Evaluate rules conditions (0 rules) 2020-02-20 18:27:32,841 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:32,840 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (SimulationControl.java:206) setText - Do pre action Rules 2020-02-20 18:27:32,842 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:32,842 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (SimulationControl.java:206) setText - Simulate one month 2020-02-20 18:27:34,530 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:34,529 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (ResultManager.java:211) isEnabled - Enabled result: [MatrixAbundance, MatrixCatchPerStrategyMetPerZonePop, MatrixFishingMortality] 2020-02-20 18:27:36,352 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:36,344 ERROR [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (InProcessSimulatorLauncher.java:480) localSimulateSameThread - Error during simulation 2020-02-20 18:27:36,353 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>java.lang.NullPointerException: null 2020-02-20 18:27:36,353 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.PopulationMonitor.getRecruitment(PopulationMonitor.java:252) ~[isis-fish-4.4.2.5.jar:4.4.2.5] 2020-02-20 18:27:36,353 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.computeMonth(DefaultSimulator.java:466) ~[?:?] 2020-02-20 18:27:36,354 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.simulate(DefaultSimulator.java:242) ~[?:?] 2020-02-20 18:27:36,354 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:430) [isis-fish-4.4.2.5.jar:4.4.2.5] 2020-02-20 18:27:36,354 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher$SimThread.run(InProcessSimulatorLauncher.java:260) [isis-fish-4.4.2.5.jar:4.4.2.5] 2020-02-20 18:27:36,365 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:36,365 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (InProcessSimulatorLauncher.java:509) localSimulateSameThread - Simulation time: 10.671 2020-02-20 18:27:36,371 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:36,371 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (IsisCacheBackendOnGuava.java:238) adjustedCache - Cache size ajusted to 576o (equivalent to 2 step need) 2020-02-20 18:27:36,373 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>--- Cache Statistiques --- 2020-02-20 18:27:36,373 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Total call: 8 2020-02-20 18:27:36,373 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Cache used: 2 2020-02-20 18:27:36,373 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Cache usage: 25% 2020-02-20 18:27:36,374 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> - 2020-02-20 18:27:36,374 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>IsisCacheBackendOnGuava initial cache size: 910,5Mo, cache size reevaluated: 576o, totalCached: 288o, numberStep: 1, numberEntries: 3 2020-02-20 18:27:36,374 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> Step min: 288o, max: 288o, mean: 288o, standard deviation: 0o 2020-02-20 18:27:36,374 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> Entry min: 48o, max: 182o, mean: 96o, standard deviation: 74o 2020-02-20 18:27:36,374 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>-------------------- 2020-02-20 18:27:36,375 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> 2020-02-20 18:27:36,395 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:36,395 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (InProcessSimulatorLauncher.java:199) message - Simulation terminée 2020-02-20 18:27:36,396 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:36,395 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27] (SimulationControl.java:206) setText - Simulation terminée 2020-02-20 18:27:36,401 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Exception in thread "SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27" fr.ifremer.isisfish.simulator.SimulationException: Error during simulation 2020-02-20 18:27:36,402 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:483) 2020-02-20 18:27:36,402 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher$SimThread.run(InProcessSimulatorLauncher.java:260) 2020-02-20 18:27:36,403 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Caused by: java.lang.NullPointerException 2020-02-20 18:27:36,403 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.PopulationMonitor.getRecruitment(PopulationMonitor.java:252) 2020-02-20 18:27:36,403 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.computeMonth(DefaultSimulator.java:466) 2020-02-20 18:27:36,403 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.simulate(DefaultSimulator.java:242) 2020-02-20 18:27:36,403 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:430) 2020-02-20 18:27:36,404 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> ... 1 more 2020-02-20 18:27:36,404 INFO [Thread-13] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:27:36,402 INFO [main] (DataStorage.java:205) getStorage - Create new storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 2020-02-20 18:27:37,371 INFO [monitor-thread] (SimulationControl.java:206) setText - Simulation terminée 2020-02-20 18:27:37,372 WARN [monitor-thread] (SimulationMonitor.java:533) checkProgression - Simulation exception : java.lang.NullPointerException at fr.ifremer.isisfish.simulator.PopulationMonitor.getRecruitment(PopulationMonitor.java:252) at simulators.DefaultSimulator.computeMonth(DefaultSimulator.java:466) at simulators.DefaultSimulator.simulate(DefaultSimulator.java:242) at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:430) at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher$SimThread.run(InProcessSimulatorLauncher.java:260) 2020-02-20 18:27:37,373 INFO [monitor-thread] (SimulationMonitor.java:457) waitAndCheckProgression - Job sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 finished 2020-02-20 18:27:37,373 INFO [monitor-thread] (SimulationMonitor.java:568) doPostSimulationOperation - Do post simulation operation for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 2020-02-20 18:27:37,378 INFO [monitor-thread] (SimulationMonitor.java:391) simulationStop - Saving simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-27 as stopped 2020-02-20 18:27:38,560 INFO [pool-3-thread-1] (SubProcessSimulationLauncher.java:251) subProcessSimulate - SubProcess finished (status = 0) 2020-02-20 18:28:01,925 ERROR [Finalizer] (TopiaContextImpl.java:880) finalize - TopiaContext org.nuiton.topia.framework.TopiaContextImpl@44f8fbe5 was not closed! 2020-02-20 18:28:01,926 ERROR [Finalizer] (TopiaContextImpl.java:880) finalize - TopiaContext org.nuiton.topia.framework.TopiaContextImpl@460258e2 was not closed! 2020-02-20 18:28:02,249 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,250 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,250 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,251 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,252 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,253 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,254 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,254 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,255 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,256 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,257 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,258 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,259 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,260 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,261 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,262 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,263 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,263 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,264 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,265 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,266 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,267 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,267 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,268 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,269 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,269 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,270 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,271 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,271 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:02,272 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,960 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,961 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,961 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,962 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,962 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,962 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,963 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,963 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,963 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,964 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,964 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,964 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,965 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,965 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:26,965 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:39,298 INFO [AWT-EventQueue-0] (RegionStorage.java:233) getRegion - Try to open region SMAC_calib_Sophie(/Users/charlotte/isis-fish-4/isis-database/regions/SMAC_calib_Sophie) 2020-02-20 18:28:39,299 INFO [AWT-EventQueue-0] (DataStorage.java:205) getStorage - Create new storage for SMAC_calib_Sophie 2020-02-20 18:28:52,739 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:52,740 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:52,740 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:52,741 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:52,742 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:52,742 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:52,743 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:52,744 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:52,744 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:52,745 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:28:52,746 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:09,667 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:10,889 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:15,098 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,001 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,001 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,002 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,002 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,003 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,004 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,004 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,005 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,006 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,006 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,006 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,007 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,007 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,008 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:32,008 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,387 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,388 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,388 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,389 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,389 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,389 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,390 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,390 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,391 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,391 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,392 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,392 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,393 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,394 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:34,394 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:29:46,244 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - backup database en cours 2020-02-20 18:29:46,291 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - backup database terminé 2020-02-20 18:29:46,294 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - Compilation des scripts 2020-02-20 18:29:46,813 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - Temps de compilation 0.517s 2020-02-20 18:29:46,884 INFO [pool-3-thread-2] (SimulationJob.java:210) run - Start simulation: sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 2020-02-20 18:29:46,887 INFO [pool-3-thread-2] (SimulationMonitor.java:347) simulationStart - Saving simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 as started 2020-02-20 18:29:46,888 INFO [pool-3-thread-2] (SubProcessSimulationLauncher.java:142) message - Préparation de la simulation 2020-02-20 18:29:46,888 INFO [pool-3-thread-2] (SimulationControl.java:206) setText - Préparation de la simulation 2020-02-20 18:29:46,891 INFO [AWT-EventQueue-0] (SimulationStorage.java:571) getSimulation - Try to open simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29(/Users/charlotte/isis-fish-4/isis-database/simulations/sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29) 2020-02-20 18:29:46,902 INFO [pool-3-thread-2] (SubProcessSimulationLauncher.java:239) subProcessSimulate - SubProcess start: java.lang.UNIXProcess@3b7442e1 [/Library/Java/JavaVirtualMachines/jdk1.8.0_221.jdk/Contents/Home/jre/bin/java, -Xmx1024M, -Djava.library.path=/Users/charlotte/isis-fish-4.4.2.5//Users/charlotte/Library/Java/Extensions:/Library/Java/Extensions:/Network/Library/Java/Extensions:/System/Library/Java/Extensions:/usr/lib/java:., -DR.type=jni, -classpath, :/System/Library/Java/Extensions/MRJToolkit.jar:/Users/charlotte/isis-fish-4.4.2.5/isis-fish-4.4.2.5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-utils-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-primitives-1.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-converter-1.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-config-3.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-version-1.0-rc-2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-validator-3.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/struts2-core-2.5.13.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ognl-3.1.15.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-fileupload-1.3.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-i18n-3.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/topia-persistence-2.13.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-csv-3.0-rc-6.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/javacsv-2.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-decorator-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-jxpath-1.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-jpa-2.1-api-1.0.0.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jta-1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/topia-service-migration-2.13.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-core-5.2.18.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jboss-logging-3.3.1.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/antlr-2.7.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jboss-transaction-api_1.2_spec-1.0.1.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jandex-2.0.3.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/classmate-1.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-commons-annotations-5.0.1.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-jcache-5.2.18.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/cache-api-1.0.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ehcache-3.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-hikaricp-5.2.18.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/HikariCP-2.5.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/asm-6.2.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-profiling-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-matrix-2.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-matrix-gui-2.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jfreechart-1.0.19.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jcommon-1.0.23.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-widgets-1.1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-lang-2.5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-collections-3.2.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/rsyntaxtextarea-2.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/rstaui-2.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/autocomplete-2.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-runtime-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/javahelp-2.0.05.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-config-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-common-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-validator-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-widgets-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-autocomplete-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jxlayer-3.0.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-j2r-1.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/JRI-0.9-9.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/REngine-1.8-5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/Rserve-1.8-5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-lang3-3.8.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-text-1.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-collections4-4.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-beanutils-1.9.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-io-2.6.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-math3-3.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/slf4j-api-1.7.25.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-logging-1.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-core-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-api-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-jcl-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-slf4j-impl-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/dom4j-2.1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxen-1.1.6.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/openmap-5.1.15.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsch-0.1.54.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-core-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-action-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-plaf-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-graphics-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-painters-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/h2-1.4.197.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/aspectjweaver-1.9.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jdistlib-0.4.5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/JTransforms-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/JLargeArrays-1.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ssj-3.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/colt-1.2.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/optimization-1.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/concurrent-1.3.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsr331-api-2.7.0-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/svnkit-1.9.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/sequence-library-1.0.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/sqljet-1.1.11.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/antlr-runtime-3.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/trilead-ssh2-1.0.0-build221.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsch.agentproxy.svnkit-trilead-ssh2-0.0.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsch.agentproxy.core-0.0.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/freemarker-2.3.28.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ecj-4.12.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/guava-26.0-jre.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsr305-3.0.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/checker-qual-2.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/error_prone_annotations-2.1.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/j2objc-annotations-1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/animal-sniffer-annotations-1.14.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/opencsv-4.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jackson-core-2.9.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jackson-databind-2.9.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jackson-annotations-2.9.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxb-api-2.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxb-core-2.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxb-impl-2.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/activation-1.1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/javassist-3.25.0-GA.jar, fr.ifremer.isisfish.IsisFish, --option, launch.ui, false, --simulateWithSimulation, sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29, /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219786241-preparation.zip] 2020-02-20 18:29:46,903 INFO [pool-3-thread-2] (SubProcessSimulationLauncher.java:279) - Lancement du thread de surveillance des simulations externes 2020-02-20 18:29:48,533 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:48,530 INFO [main] (IsisFish.java:136) main - Starting Isis-Fish 4.4.2.5 with args : [--option, launch.ui, false, --simulateWithSimulation, sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29, /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219786241-preparation.zip] 2020-02-20 18:29:48,536 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:48,536 INFO [main] (IsisFish.java:137) main - Date: 20/02/20 18:29 2020-02-20 18:29:48,537 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:48,536 INFO [main] (IsisFish.java:138) main - Java version: 1.8.0_221-b11, Java HotSpot(TM) 64-Bit Server VM 2020-02-20 18:29:48,537 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:48,537 INFO [main] (IsisFish.java:139) main - Plaform/arch: Mac OS X/x86_64 2020-02-20 18:29:48,537 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:48,537 INFO [main] (IsisFish.java:140) main - R_HOME: null 2020-02-20 18:29:48,538 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:48,538 INFO [main] (IsisFish.java:141) main - PATH: /Library/Frameworks/Python.framework/Versions/3.6/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin 2020-02-20 18:29:49,405 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,405 WARN [main] (RUtil.java:98) parseRscriptOutput - Can't locate rJava package using Rscript (probably not installed) 2020-02-20 18:29:49,462 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,462 INFO [main] (IsisFish.java:166) main - after init done in 1.072. 2020-02-20 18:29:49,463 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,463 INFO [main] (SimulationAction.java:173) simulateWithSimulationAndScript - Command line action : simulateWithSimulationAndScript (sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29, /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219786241-preparation.zip, null) 2020-02-20 18:29:49,477 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,476 INFO [main] (SimulationExecutor.java:87) - SimulationExecutor started with 4 thread for dans un sous processus 2020-02-20 18:29:49,589 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,588 INFO [main] (SimulationExecutor.java:87) - SimulationExecutor started with 2 thread for sur le serveur Datarmor 2020-02-20 18:29:49,590 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,590 INFO [main] (SimulationExecutor.java:87) - SimulationExecutor started with 2 thread for dans le même processus 2020-02-20 18:29:49,591 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,590 INFO [main] (InProcessSimulatorLauncher.java:106) simulate - simulate sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 with file /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219786241-preparation.zip 2020-02-20 18:29:49,606 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,605 WARN [main] (InProcessSimulatorLauncher.java:114) simulate - Warning , simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 aleady exists 2020-02-20 18:29:49,606 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,606 WARN [main] (InProcessSimulatorLauncher.java:115) simulate - Deleting it before doing simulation 2020-02-20 18:29:49,607 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,606 INFO [main] (SimulationStorage.java:571) getSimulation - Try to open simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29(/Users/charlotte/isis-fish-4/isis-database/simulations/sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29) 2020-02-20 18:29:49,609 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,608 INFO [main] (SimulationStorage.java:773) importAndRenameZip - Import simulation file /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219786241-preparation.zip in directory /Users/charlotte/isis-fish-4/isis-database/simulations and rename from ^.*?/(.*)$ to sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29/$1 2020-02-20 18:29:49,672 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,671 INFO [main] (SimulationStorage.java:780) importAndRenameZip - Last entry was sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29/scripts/MinimisationUtil.java extract name sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 2020-02-20 18:29:49,672 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:49,672 INFO [main] (DataStorage.java:205) getStorage - Create new storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 2020-02-20 18:29:54,927 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:54,927 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (InProcessSimulatorLauncher.java:338) localSimulateSameThread - 20/02/20 18:29 Java version: 1.8.0_221-b11 Isis-fish version: 4.4.2.5 2020-02-20 18:29:55,423 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:55,423 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (InProcessSimulatorLauncher.java:199) message - Mise en place des aspects Cache 2020-02-20 18:29:55,424 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:55,423 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (SimulationControl.java:206) setText - Mise en place des aspects Cache 2020-02-20 18:29:56,898 INFO [monitor-thread] (SimulationControl.java:206) setText - Mise en place des aspects Cache 2020-02-20 18:29:57,024 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:57,024 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (DataStorage.java:162) getMemStorage - Create new memory storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 2020-02-20 18:29:57,435 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:57,434 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (DataStorage.java:205) getStorage - Create new storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 2020-02-20 18:29:57,436 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:57,436 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (TopiaContextImpl.java:247) loadServices - Service 'topia.service.migration' chargé par 'org.nuiton.topia.migration.TopiaMigrationEngine' 2020-02-20 18:29:58,852 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:58,851 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (TopiaMigrationEngine.java:547) detectDbVersion - Version de base détectée : 4.4 2020-02-20 18:29:58,853 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:58,852 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (TopiaMigrationEngine.java:313) migrateSchema - Démarrage du service de mise à jour - version de l'application : 4.4, version de la base : 4.4 2020-02-20 18:29:58,870 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:58,870 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (TopiaMigrationEngine.java:338) migrateSchema - La base est à jour, aucune migration nécessaire. 2020-02-20 18:29:59,329 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:59,328 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (InProcessSimulatorLauncher.java:199) message - Simulation execution 2020-02-20 18:29:59,329 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:59,329 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (SimulationControl.java:206) setText - Simulation execution 2020-02-20 18:29:59,331 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:59,330 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (SimulationContext.java:486) message - Exécution des scripts de Presimulation 2020-02-20 18:29:59,331 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:59,331 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (SimulationControl.java:206) setText - Exécution des scripts de Presimulation 2020-02-20 18:29:59,340 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:59,340 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (InProcessSimulatorLauncher.java:428) localSimulateSameThread - Matrix backend: org.nuiton.math.matrix.DoubleBigVector and org.nuiton.math.matrix.DoubleSparseHashVector threshold: 1000 2020-02-20 18:29:59,706 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:29:59,706 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (IsisCacheBackendOnGuava.java:238) adjustedCache - Cache size ajusted to 410,5Mo (equivalent to 0 step need) 2020-02-20 18:30:00,475 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:00,475 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (SimulationControl.java:206) setText - Rules initialisation:[] 2020-02-20 18:30:00,499 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:00,499 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (SimulationControl.java:206) setText - begin step janvier 0 2020-02-20 18:30:00,500 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:00,500 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (SimulationControl.java:206) setText - Reloading parameters 2020-02-20 18:30:00,504 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:00,503 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (SimulationControl.java:206) setText - Evaluate rules conditions (0 rules) 2020-02-20 18:30:00,506 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:00,505 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (SimulationControl.java:206) setText - Do pre action Rules 2020-02-20 18:30:00,507 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:00,507 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (SimulationControl.java:206) setText - Simulate one month 2020-02-20 18:30:01,897 INFO [monitor-thread] (SimulationControl.java:206) setText - Simulate one month 2020-02-20 18:30:02,029 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:02,029 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (ResultManager.java:211) isEnabled - Enabled result: [MatrixAbundance, MatrixCatchPerStrategyMetPerZonePop, MatrixFishingMortality] 2020-02-20 18:30:02,878 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:02,873 ERROR [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (InProcessSimulatorLauncher.java:480) localSimulateSameThread - Error during simulation 2020-02-20 18:30:02,878 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>java.lang.NullPointerException: null 2020-02-20 18:30:02,878 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.PopulationMonitor.getRecruitment(PopulationMonitor.java:252) ~[isis-fish-4.4.2.5.jar:4.4.2.5] 2020-02-20 18:30:02,878 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.computeMonth(DefaultSimulator.java:466) ~[?:?] 2020-02-20 18:30:02,879 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.simulate(DefaultSimulator.java:242) ~[?:?] 2020-02-20 18:30:02,879 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:430) [isis-fish-4.4.2.5.jar:4.4.2.5] 2020-02-20 18:30:02,879 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher$SimThread.run(InProcessSimulatorLauncher.java:260) [isis-fish-4.4.2.5.jar:4.4.2.5] 2020-02-20 18:30:02,886 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:02,886 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (InProcessSimulatorLauncher.java:509) localSimulateSameThread - Simulation time: 7.942 2020-02-20 18:30:02,888 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:02,888 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (IsisCacheBackendOnGuava.java:238) adjustedCache - Cache size ajusted to 580o (equivalent to 2 step need) 2020-02-20 18:30:02,889 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>--- Cache Statistiques --- 2020-02-20 18:30:02,890 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Total call: 8 2020-02-20 18:30:02,890 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Cache used: 2 2020-02-20 18:30:02,890 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Cache usage: 25% 2020-02-20 18:30:02,890 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> - 2020-02-20 18:30:02,890 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>IsisCacheBackendOnGuava initial cache size: 910,5Mo, cache size reevaluated: 580o, totalCached: 290o, numberStep: 1, numberEntries: 3 2020-02-20 18:30:02,891 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> Step min: 290o, max: 290o, mean: 290o, standard deviation: 0o 2020-02-20 18:30:02,891 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> Entry min: 48o, max: 184o, mean: 96o, standard deviation: 75o 2020-02-20 18:30:02,891 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>-------------------- 2020-02-20 18:30:02,891 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> 2020-02-20 18:30:02,913 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:02,913 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (InProcessSimulatorLauncher.java:199) message - Simulation terminée 2020-02-20 18:30:02,914 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:02,913 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29] (SimulationControl.java:206) setText - Simulation terminée 2020-02-20 18:30:02,916 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Exception in thread "SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29" fr.ifremer.isisfish.simulator.SimulationException: Error during simulation 2020-02-20 18:30:02,917 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:483) 2020-02-20 18:30:02,917 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher$SimThread.run(InProcessSimulatorLauncher.java:260) 2020-02-20 18:30:02,917 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Caused by: java.lang.NullPointerException 2020-02-20 18:30:02,917 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.PopulationMonitor.getRecruitment(PopulationMonitor.java:252) 2020-02-20 18:30:02,918 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.computeMonth(DefaultSimulator.java:466) 2020-02-20 18:30:02,918 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.simulate(DefaultSimulator.java:242) 2020-02-20 18:30:02,918 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:430) 2020-02-20 18:30:02,918 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> ... 1 more 2020-02-20 18:30:02,918 INFO [Thread-18] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:02,917 INFO [main] (DataStorage.java:205) getStorage - Create new storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 2020-02-20 18:30:04,072 INFO [pool-3-thread-2] (SubProcessSimulationLauncher.java:251) subProcessSimulate - SubProcess finished (status = 0) 2020-02-20 18:30:06,891 INFO [monitor-thread] (SimulationControl.java:206) setText - Simulation terminée 2020-02-20 18:30:06,892 WARN [monitor-thread] (SimulationMonitor.java:533) checkProgression - Simulation exception : java.lang.NullPointerException at fr.ifremer.isisfish.simulator.PopulationMonitor.getRecruitment(PopulationMonitor.java:252) at simulators.DefaultSimulator.computeMonth(DefaultSimulator.java:466) at simulators.DefaultSimulator.simulate(DefaultSimulator.java:242) at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:430) at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher$SimThread.run(InProcessSimulatorLauncher.java:260) 2020-02-20 18:30:06,894 INFO [monitor-thread] (SimulationMonitor.java:457) waitAndCheckProgression - Job sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 finished 2020-02-20 18:30:06,895 INFO [monitor-thread] (SimulationMonitor.java:568) doPostSimulationOperation - Do post simulation operation for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 2020-02-20 18:30:06,902 INFO [monitor-thread] (SimulationMonitor.java:391) simulationStop - Saving simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-29 as stopped 2020-02-20 18:30:25,336 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - backup database en cours 2020-02-20 18:30:25,373 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - backup database terminé 2020-02-20 18:30:25,376 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - Compilation des scripts 2020-02-20 18:30:25,860 INFO [AWT-EventQueue-0] (SimulationControl.java:206) setText - Temps de compilation 0.483s 2020-02-20 18:30:25,955 INFO [pool-3-thread-3] (SimulationJob.java:210) run - Start simulation: sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 2020-02-20 18:30:25,958 INFO [pool-3-thread-3] (SimulationMonitor.java:347) simulationStart - Saving simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 as started 2020-02-20 18:30:25,958 INFO [pool-3-thread-3] (SubProcessSimulationLauncher.java:142) message - Préparation de la simulation 2020-02-20 18:30:25,959 INFO [pool-3-thread-3] (SimulationControl.java:206) setText - Préparation de la simulation 2020-02-20 18:30:25,967 INFO [AWT-EventQueue-0] (SimulationStorage.java:571) getSimulation - Try to open simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30(/Users/charlotte/isis-fish-4/isis-database/simulations/sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30) 2020-02-20 18:30:25,981 INFO [pool-3-thread-3] (SubProcessSimulationLauncher.java:239) subProcessSimulate - SubProcess start: java.lang.UNIXProcess@7f999150 [/Library/Java/JavaVirtualMachines/jdk1.8.0_221.jdk/Contents/Home/jre/bin/java, -Xmx1024M, -Djava.library.path=/Users/charlotte/isis-fish-4.4.2.5//Users/charlotte/Library/Java/Extensions:/Library/Java/Extensions:/Network/Library/Java/Extensions:/System/Library/Java/Extensions:/usr/lib/java:., -DR.type=jni, -classpath, :/System/Library/Java/Extensions/MRJToolkit.jar:/Users/charlotte/isis-fish-4.4.2.5/isis-fish-4.4.2.5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-utils-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-primitives-1.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-converter-1.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-config-3.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-version-1.0-rc-2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-validator-3.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/struts2-core-2.5.13.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ognl-3.1.15.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-fileupload-1.3.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-i18n-3.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/topia-persistence-2.13.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-csv-3.0-rc-6.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/javacsv-2.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-decorator-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-jxpath-1.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-jpa-2.1-api-1.0.0.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jta-1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/topia-service-migration-2.13.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-core-5.2.18.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jboss-logging-3.3.1.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/antlr-2.7.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jboss-transaction-api_1.2_spec-1.0.1.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jandex-2.0.3.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/classmate-1.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-commons-annotations-5.0.1.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-jcache-5.2.18.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/cache-api-1.0.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ehcache-3.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/hibernate-hikaricp-5.2.18.Final.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/HikariCP-2.5.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/asm-6.2.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-profiling-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-matrix-2.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-matrix-gui-2.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jfreechart-1.0.19.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jcommon-1.0.23.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-widgets-1.1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-lang-2.5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-collections-3.2.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/rsyntaxtextarea-2.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/rstaui-2.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/autocomplete-2.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-runtime-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/javahelp-2.0.05.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-config-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-common-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-validator-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxx-widgets-2.43.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-autocomplete-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jxlayer-3.0.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/nuiton-j2r-1.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/JRI-0.9-9.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/REngine-1.8-5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/Rserve-1.8-5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-lang3-3.8.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-text-1.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-collections4-4.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-beanutils-1.9.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-io-2.6.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-math3-3.6.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/slf4j-api-1.7.25.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/commons-logging-1.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-core-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-api-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-jcl-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/log4j-slf4j-impl-2.11.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/dom4j-2.1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxen-1.1.6.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/openmap-5.1.15.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsch-0.1.54.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-core-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-action-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-plaf-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-graphics-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/swingx-painters-1.6.5-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/h2-1.4.197.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/aspectjweaver-1.9.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jdistlib-0.4.5.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/JTransforms-3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/JLargeArrays-1.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ssj-3.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/colt-1.2.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/optimization-1.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/concurrent-1.3.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsr331-api-2.7.0-1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/svnkit-1.9.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/sequence-library-1.0.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/sqljet-1.1.11.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/antlr-runtime-3.4.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/trilead-ssh2-1.0.0-build221.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsch.agentproxy.svnkit-trilead-ssh2-0.0.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsch.agentproxy.core-0.0.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/freemarker-2.3.28.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/ecj-4.12.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/guava-26.0-jre.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jsr305-3.0.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/checker-qual-2.5.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/error_prone_annotations-2.1.3.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/j2objc-annotations-1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/animal-sniffer-annotations-1.14.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/opencsv-4.2.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jackson-core-2.9.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jackson-databind-2.9.7.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jackson-annotations-2.9.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxb-api-2.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxb-core-2.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/jaxb-impl-2.3.0.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/activation-1.1.1.jar:/Users/charlotte/isis-fish-4.4.2.5/lib/javassist-3.25.0-GA.jar, fr.ifremer.isisfish.IsisFish, --option, launch.ui, false, --simulateWithSimulation, sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30, /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219825331-preparation.zip] 2020-02-20 18:30:25,982 INFO [pool-3-thread-3] (SubProcessSimulationLauncher.java:279) - Lancement du thread de surveillance des simulations externes 2020-02-20 18:30:27,526 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:27,522 INFO [main] (IsisFish.java:136) main - Starting Isis-Fish 4.4.2.5 with args : [--option, launch.ui, false, --simulateWithSimulation, sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30, /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219825331-preparation.zip] 2020-02-20 18:30:27,530 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:27,530 INFO [main] (IsisFish.java:137) main - Date: 20/02/20 18:30 2020-02-20 18:30:27,531 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:27,530 INFO [main] (IsisFish.java:138) main - Java version: 1.8.0_221-b11, Java HotSpot(TM) 64-Bit Server VM 2020-02-20 18:30:27,531 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:27,531 INFO [main] (IsisFish.java:139) main - Plaform/arch: Mac OS X/x86_64 2020-02-20 18:30:27,531 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:27,531 INFO [main] (IsisFish.java:140) main - R_HOME: null 2020-02-20 18:30:27,531 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:27,531 INFO [main] (IsisFish.java:141) main - PATH: /Library/Frameworks/Python.framework/Versions/3.6/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin 2020-02-20 18:30:28,463 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,463 WARN [main] (RUtil.java:98) parseRscriptOutput - Can't locate rJava package using Rscript (probably not installed) 2020-02-20 18:30:28,539 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,538 INFO [main] (IsisFish.java:166) main - after init done in 1.218. 2020-02-20 18:30:28,539 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,539 INFO [main] (SimulationAction.java:173) simulateWithSimulationAndScript - Command line action : simulateWithSimulationAndScript (sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30, /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219825331-preparation.zip, null) 2020-02-20 18:30:28,556 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,556 INFO [main] (SimulationExecutor.java:87) - SimulationExecutor started with 4 thread for dans un sous processus 2020-02-20 18:30:28,661 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,661 INFO [main] (SimulationExecutor.java:87) - SimulationExecutor started with 2 thread for sur le serveur Datarmor 2020-02-20 18:30:28,662 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,662 INFO [main] (SimulationExecutor.java:87) - SimulationExecutor started with 2 thread for dans le même processus 2020-02-20 18:30:28,663 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,662 INFO [main] (InProcessSimulatorLauncher.java:106) simulate - simulate sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 with file /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219825331-preparation.zip 2020-02-20 18:30:28,677 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,677 WARN [main] (InProcessSimulatorLauncher.java:114) simulate - Warning , simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 aleady exists 2020-02-20 18:30:28,678 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,677 WARN [main] (InProcessSimulatorLauncher.java:115) simulate - Deleting it before doing simulation 2020-02-20 18:30:28,679 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,678 INFO [main] (SimulationStorage.java:571) getSimulation - Try to open simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30(/Users/charlotte/isis-fish-4/isis-database/simulations/sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30) 2020-02-20 18:30:28,682 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,680 INFO [main] (SimulationStorage.java:773) importAndRenameZip - Import simulation file /var/folders/rk/9knvmkyd6vz7nlznn4mpz61h0000gp/T/isisfish-simulation-1582219825331-preparation.zip in directory /Users/charlotte/isis-fish-4/isis-database/simulations and rename from ^.*?/(.*)$ to sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30/$1 2020-02-20 18:30:28,748 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,747 INFO [main] (SimulationStorage.java:780) importAndRenameZip - Last entry was sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30/scripts/MinimisationUtil.java extract name sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 2020-02-20 18:30:28,749 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:28,748 INFO [main] (DataStorage.java:205) getStorage - Create new storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 2020-02-20 18:30:33,993 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:33,992 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (InProcessSimulatorLauncher.java:338) localSimulateSameThread - 20/02/20 18:30 Java version: 1.8.0_221-b11 Isis-fish version: 4.4.2.5 2020-02-20 18:30:34,452 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:34,451 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (InProcessSimulatorLauncher.java:199) message - Mise en place des aspects Cache 2020-02-20 18:30:34,452 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:34,452 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (SimulationControl.java:206) setText - Mise en place des aspects Cache 2020-02-20 18:30:35,887 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:35,887 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (DataStorage.java:162) getMemStorage - Create new memory storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 2020-02-20 18:30:35,966 INFO [monitor-thread] (SimulationControl.java:206) setText - Mise en place des aspects Cache 2020-02-20 18:30:36,350 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:36,350 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (DataStorage.java:205) getStorage - Create new storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 2020-02-20 18:30:36,352 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:36,351 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (TopiaContextImpl.java:247) loadServices - Service 'topia.service.migration' chargé par 'org.nuiton.topia.migration.TopiaMigrationEngine' 2020-02-20 18:30:37,614 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:37,614 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (TopiaMigrationEngine.java:547) detectDbVersion - Version de base détectée : 4.4 2020-02-20 18:30:37,614 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:37,614 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (TopiaMigrationEngine.java:313) migrateSchema - Démarrage du service de mise à jour - version de l'application : 4.4, version de la base : 4.4 2020-02-20 18:30:37,642 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:37,642 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (TopiaMigrationEngine.java:338) migrateSchema - La base est à jour, aucune migration nécessaire. 2020-02-20 18:30:38,075 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:38,075 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (InProcessSimulatorLauncher.java:199) message - Simulation execution 2020-02-20 18:30:38,076 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:38,076 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (SimulationControl.java:206) setText - Simulation execution 2020-02-20 18:30:38,077 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:38,077 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (SimulationContext.java:486) message - Exécution des scripts de Presimulation 2020-02-20 18:30:38,078 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:38,077 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (SimulationControl.java:206) setText - Exécution des scripts de Presimulation 2020-02-20 18:30:38,087 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:38,087 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (InProcessSimulatorLauncher.java:428) localSimulateSameThread - Matrix backend: org.nuiton.math.matrix.DoubleBigVector and org.nuiton.math.matrix.DoubleSparseHashVector threshold: 1000 2020-02-20 18:30:38,450 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:38,450 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (IsisCacheBackendOnGuava.java:238) adjustedCache - Cache size ajusted to 410,5Mo (equivalent to 0 step need) 2020-02-20 18:30:39,211 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:39,210 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (SimulationControl.java:206) setText - Rules initialisation:[] 2020-02-20 18:30:39,237 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:39,237 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (SimulationControl.java:206) setText - begin step janvier 0 2020-02-20 18:30:39,239 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:39,238 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (SimulationControl.java:206) setText - Reloading parameters 2020-02-20 18:30:39,242 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:39,242 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (SimulationControl.java:206) setText - Evaluate rules conditions (0 rules) 2020-02-20 18:30:39,243 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:39,243 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (SimulationControl.java:206) setText - Do pre action Rules 2020-02-20 18:30:39,245 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:39,244 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (SimulationControl.java:206) setText - Simulate one month 2020-02-20 18:30:40,886 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:40,885 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (ResultManager.java:211) isEnabled - Enabled result: [MatrixAbundance, MatrixCatchPerStrategyMetPerZonePop, MatrixFishingMortality] 2020-02-20 18:30:40,961 INFO [monitor-thread] (SimulationControl.java:206) setText - Simulate one month 2020-02-20 18:30:41,982 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:41,977 ERROR [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (InProcessSimulatorLauncher.java:480) localSimulateSameThread - Error during simulation 2020-02-20 18:30:41,983 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>java.lang.NullPointerException: null 2020-02-20 18:30:41,983 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.PopulationMonitor.getRecruitment(PopulationMonitor.java:252) ~[isis-fish-4.4.2.5.jar:4.4.2.5] 2020-02-20 18:30:41,984 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.computeMonth(DefaultSimulator.java:466) ~[?:?] 2020-02-20 18:30:41,984 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.simulate(DefaultSimulator.java:242) ~[?:?] 2020-02-20 18:30:41,984 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:430) [isis-fish-4.4.2.5.jar:4.4.2.5] 2020-02-20 18:30:41,984 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher$SimThread.run(InProcessSimulatorLauncher.java:260) [isis-fish-4.4.2.5.jar:4.4.2.5] 2020-02-20 18:30:41,993 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:41,992 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (InProcessSimulatorLauncher.java:509) localSimulateSameThread - Simulation time: 7.981 2020-02-20 18:30:41,996 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:41,996 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (IsisCacheBackendOnGuava.java:238) adjustedCache - Cache size ajusted to 576o (equivalent to 2 step need) 2020-02-20 18:30:41,997 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>--- Cache Statistiques --- 2020-02-20 18:30:41,998 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Total call: 8 2020-02-20 18:30:41,998 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Cache used: 2 2020-02-20 18:30:41,998 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Cache usage: 25% 2020-02-20 18:30:41,998 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> - 2020-02-20 18:30:41,998 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>IsisCacheBackendOnGuava initial cache size: 910,5Mo, cache size reevaluated: 576o, totalCached: 288o, numberStep: 1, numberEntries: 3 2020-02-20 18:30:41,999 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> Step min: 288o, max: 288o, mean: 288o, standard deviation: 0o 2020-02-20 18:30:41,999 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> Entry min: 48o, max: 182o, mean: 96o, standard deviation: 74o 2020-02-20 18:30:41,999 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>-------------------- 2020-02-20 18:30:41,999 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> 2020-02-20 18:30:42,029 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:42,029 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (InProcessSimulatorLauncher.java:199) message - Simulation terminée 2020-02-20 18:30:42,030 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:42,029 INFO [SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30] (SimulationControl.java:206) setText - Simulation terminée 2020-02-20 18:30:42,034 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Exception in thread "SimThread sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30" fr.ifremer.isisfish.simulator.SimulationException: Error during simulation 2020-02-20 18:30:42,035 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:483) 2020-02-20 18:30:42,035 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher$SimThread.run(InProcessSimulatorLauncher.java:260) 2020-02-20 18:30:42,035 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>Caused by: java.lang.NullPointerException 2020-02-20 18:30:42,035 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.PopulationMonitor.getRecruitment(PopulationMonitor.java:252) 2020-02-20 18:30:42,035 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.computeMonth(DefaultSimulator.java:466) 2020-02-20 18:30:42,035 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at simulators.DefaultSimulator.simulate(DefaultSimulator.java:242) 2020-02-20 18:30:42,036 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:430) 2020-02-20 18:30:42,036 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus> ... 1 more 2020-02-20 18:30:42,036 INFO [Thread-19] (SubProcessSimulationLauncher.java:302) run - dans un sous processus>2020-02-20 18:30:42,035 INFO [main] (DataStorage.java:205) getStorage - Create new storage for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 2020-02-20 18:30:43,226 INFO [pool-3-thread-3] (SubProcessSimulationLauncher.java:251) subProcessSimulate - SubProcess finished (status = 0) 2020-02-20 18:30:45,960 INFO [monitor-thread] (SimulationControl.java:206) setText - Simulation terminée 2020-02-20 18:30:45,961 WARN [monitor-thread] (SimulationMonitor.java:533) checkProgression - Simulation exception : java.lang.NullPointerException at fr.ifremer.isisfish.simulator.PopulationMonitor.getRecruitment(PopulationMonitor.java:252) at simulators.DefaultSimulator.computeMonth(DefaultSimulator.java:466) at simulators.DefaultSimulator.simulate(DefaultSimulator.java:242) at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher.localSimulateSameThread(InProcessSimulatorLauncher.java:430) at fr.ifremer.isisfish.simulator.launcher.InProcessSimulatorLauncher$SimThread.run(InProcessSimulatorLauncher.java:260) 2020-02-20 18:30:45,961 INFO [monitor-thread] (SimulationMonitor.java:457) waitAndCheckProgression - Job sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 finished 2020-02-20 18:30:45,962 INFO [monitor-thread] (SimulationMonitor.java:568) doPostSimulationOperation - Do post simulation operation for sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 2020-02-20 18:30:45,969 INFO [monitor-thread] (SimulationMonitor.java:391) simulationStop - Saving simulation sim_sim_sar-pop_only-test-1an-10000ind_V2_2020-02-20-18-30 as stopped 2020-02-20 18:30:58,924 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,924 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,925 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,925 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,925 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,926 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,926 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,926 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,927 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,927 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,927 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,927 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,928 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,928 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,929 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,929 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,929 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,930 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,930 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,931 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,931 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,932 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,932 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,933 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,934 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,935 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,936 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,936 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,937 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation 2020-02-20 18:30:58,938 WARN [AWT-EventQueue-0] (EvaluatorHelper.java:282) catchEvaluateException - Error in equation